Cy5 NHS ester

Unit Size
Price (USD)
Cat.#: 1321-1
Unit size: 1 mg
in stock
Cat.#: 1321-5
Unit size: 5 mg
in stock
Cat.#: 1321-25
Unit size: 25 mg
in stock
Cat.#: 1321-100
Unit size: 100 mg
in stock

Cy5 dye (also sold under Sulfo-Cyanine5 name) is one of the most popular far-red fluorescent dyes. It is often a reagent of choice for protein and peptide labeling. Cy5 dye is a water-soluble, bright, far-red-fluorescent dye with excitation ideally suited for the 633 nm or 647 nm laser lines. Cy5 conjugates of antibodies, peptides, and proteins are pH insensitive from pH 4 to pH 10. A significant advantage to using long wavelength dyes such as Cy5 or AF 647 dye over other fluorophores is the low autofluorescence of biological specimens in this region of the spectrum.

The NHS ester (or succinimidyl ester) is the most popular amine reactive group for labeling with the primary amines of proteins (Lys), amine-modified oligonucleotides, and other amine-containing molecules. We do not recommend using Cy5 NHS ester for labeling proteins at high molar ration due significant self-quenching. Cy5 conjugates are recommended for detection of moderate-to-high abundance targets. For detection of low-abundance biological targets we recommend using AZDye 647 (Alexa Fluor® 647 analog), or IR 650 dye (IRDye® 650 analog), which can be attached to proteins at high molar ratios without significant self-quenching, enabling brighter conjugates and more sensitive detection.

Primary amine
Abs/Em Maxima
648/671 nm
Extinction coefficient
250,000 cm-1M-1
Water, DMSO, DMF
Spectrally similar dyes
Alexa Fluor® 647, DyLight® 649,
Molecular weight
Storage conditions
Shipping conditions
Ambient temperature


Enter only one — either volume or amount of protein to be labeled
Enter only one — either maximum concentration of DMSO or volume DMSO added to label

Cy®Dye is a trademark of GE Healthcare.